Gene: LOC_Os03g08440 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os03g08440
Transcript Identifier
LOC_Os03g08440.1
Gene Type
Coding gene
Location
Chr3 : 4337050-4338810 : negative

Family

Gene family
HOM04M001571
(95 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
ribosomal protein S2, putative, expressed

Identifiers

Type Value
idLOC_Os03g08440.MSUv7.0
pacid33127790
tidLOC_Os03g08440.1.MSUv7.0
tidLOC_Os03g08440.1
RAPOs03g0182600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IBA, IEA, UniProttranslation
GO:0000028 IBA, IEA, UniProtribosomal small subunit assembly
GO:0000447 IBAUniProtendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000461 IBAUniProtendonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006407 IBAUniProtrRNA export from nucleus
GO:0042256 IEAPLAZA Integrative Orthologymature ribosome assemblyAT1G72370
GO:0042255 IEAPLAZA Integrative Orthologyribosome assemblyAT3G04770
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT1G72370
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT1G72370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IBA, IEA, UniProtstructural constituent of ribosome
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT1G72370

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622 IEAInterProintracellular
GO:0005840 IEAInterProribosome
GO:0015935 IEAInterProsmall ribosomal subunit
GO:0022627 IBA, IEA, UniProtcytosolic small ribosomal subunit
GO:0030686 IBAUniProt90S preribosome
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G72370
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G72370
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G72370
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G72370
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G72370
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G72370
GO:0042788 IEAPLAZA Integrative Orthologypolysomal ribosomeAT3G04770
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G72370
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G72370

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001865Ribosomal protein S2
IPR027498Ribosomal protein S2, eukaryotic
IPR005707Ribosomal protein S2, eukaryotic/archaeal
IPR018130Ribosomal protein S2, conserved site
IPR023591Ribosomal protein S2, flavodoxin-like domain

Mapman id Description
17.1.3.1.1.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPSa
No SignalP domains detected for this gene.