Gene: LOC_Os03g07580 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os03g07580
Transcript Identifier
LOC_Os03g07580.1
Gene Type
Coding gene
Location
Chr3 : 3859843-3863715 : positive

Family

Gene family
HOM04M001313
(111 genes in 29 species)
specific family
Subfamily
ORTHO04M004561
(45 genes in 26 species)
specific family

Descriptions

Description
OsNucAP1 - Putative Nucleoporin Autopeptidase homologue, expressed

Identifiers

Type Value
idLOC_Os03g07580.MSUv7.0
pacid33130760
tidLOC_Os03g07580.1.MSUv7.0
tidLOC_Os03g07580.1
RAPOs03g0172000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006810 IEAInterProtransport
GO:0009870 IEAUniProtdefense response signaling pathway, resistance gene-dependent
GO:0000973 IBAUniProtposttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0006606 IBAUniProtprotein import into nucleus
GO:0009733 IEAUniProtresponse to auxin
GO:0006405 IBAUniProtRNA export from nucleus
GO:0034398 IBAUniProttelomere tethering at nuclear periphery
GO:0006406 IEAPLAZA Integrative OrthologymRNA export from nucleusAT1G80680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008139 IBAUniProtnuclear localization sequence binding
GO:0005487 IBAUniProtnucleocytoplasmic transporter activity
GO:0003723 IBAUniProtRNA binding
GO:0017056 IBAUniProtstructural constituent of nuclear pore
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G80680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005643 IEAInterPronuclear pore
GO:0031965 IEAUniProtnuclear membrane
GO:0044614 IBAUniProtnuclear pore cytoplasmic filaments
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G80680
GO:0005635 IEAPLAZA Integrative Orthologynuclear envelopeAT1G80680

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007230Peptidase S59, nucleoporin
IPR021967Nuclear protein 96

Mapman id Description
23.5.1.1.1.4.Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (NUP96)
No SignalP domains detected for this gene.