Gene: LOC_Os02g41510 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os02g41510
Transcript Identifier
LOC_Os02g41510.1
Gene Type
Coding gene
Location
Chr2 : 24878916-24879810 : negative

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
MYB family transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os02g41510.MSUv7.0
pacid33136030
tidLOC_Os02g41510.1.MSUv7.0
tidLOC_Os02g41510.1
RAPOs02g0624300

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030154 IBAUniProtcell differentiation
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT3G23250
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G23250
GO:0010200 IEAPLAZA Integrative Orthologyresponse to chitinAT3G23250
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G23250
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT3G23250
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT3G23250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBAUniProtnucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.