Gene: LOC_Os01g73430 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g73430
Transcript Identifier
LOC_Os01g73430.1
Gene Type
Coding gene
Location
Chr1 : 42549843-42556862 : negative

Family

Gene family
HOM04M000937
(146 genes in 26 species)
specific family

Descriptions

Description
RNA polymerase IV largest subunit, putative, expressed

Identifiers

Type Value
idLOC_Os01g73430.MSUv7.0
pacid33119962
tidLOC_Os01g73430.1.MSUv7.0
tidLOC_Os01g73430.1
RAPOs01g0965000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAInterProtranscription, DNA-templated
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT2G40030
GO:0030422 IEAPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT2G40030
GO:0035194 IEAPLAZA Integrative Orthologyposttranscriptional gene silencing by RNAAT2G40030
GO:0006306 IEAPLAZA Integrative OrthologyDNA methylationAT2G40030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0003899 IEAInterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G40030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G40030
GO:0030880 IEAPLAZA Integrative OrthologyRNA polymerase complexAT2G40030
GO:0000418 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT2G40030
GO:0000419 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT2G40030
GO:0016604 IEAPLAZA Integrative Orthologynuclear bodyAT2G40030
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G40030

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000722RNA polymerase, alpha subunit
IPR007080RNA polymerase Rpb1, domain 1
IPR006592RNA polymerase, N-terminal

Mapman id Description
15.1.5.1.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol V catalytic components.subunit 1
No SignalP domains detected for this gene.