Gene: LOC_Os01g59660 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g59660
Transcript Identifier
LOC_Os01g59660.2
Gene Type
Coding gene
Location
Chr1 : 34509409-34512397 : positive

Family

Gene family
HOM04M000010
(3187 genes in 28 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
MYB family transcription factor, putative, expressed

Identifiers

Type Value
idLOC_Os01g59660.MSUv7.0
pacid33120222
tidLOC_Os01g59660.2.MSUv7.0
tidLOC_Os01g59660.2
RAPOs01g0812000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAUniProtregulation of transcription, DNA-templated
GO:0030154 IBA, IEA, UniProtcell differentiation
GO:0009908 IEAUniProtflower development
GO:0006357 IBAUniProtregulation of transcription from RNA polymerase II promoter
GO:0006351 IEAUniProttranscription, DNA-templated
GO:0045926 IEAPLAZA Integrative Orthologynegative regulation of growthAT3G11440
GO:1901371 IEAPLAZA Integrative Orthologyregulation of leaf morphogenesisAT2G32460
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT5G55020
GO:0008285 IEAPLAZA Integrative Orthologynegative regulation of cell proliferationAT3G11440
GO:0043068 IEAPLAZA Integrative Orthologypositive regulation of programmed cell deathAT3G11440
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT2G32460
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT3G11440
GO:0048655 IEAPLAZA Integrative Orthologyanther wall tapetum morphogenesisAT3G11440
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT3G11440
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G06100
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT3G11440
GO:0009789 IEAPLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathwayAT2G32460
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT2G32460
GO:0048235 IEAPLAZA Integrative Orthologypollen sperm cell differentiationAT3G11440
GO:0048653 IEAPLAZA Integrative Orthologyanther developmentAT3G11440
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G11440
GO:1990019 IEAPLAZA Integrative Orthologyprotein storage vacuole organizationAT3G11440
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT2G32460
GO:0080092 IEAPLAZA Integrative Orthologyregulation of pollen tube growthAT2G32460

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAUniProtDNA binding
GO:0000981 IBAUniProtRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0043565 IBAUniProtsequence-specific DNA binding
GO:0001135 IBAUniProttranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0044212 IBAUniProttranscription regulatory region DNA binding
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT3G11440

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IBA, IEA, UniProtnucleus
GO:0090406 IEAPLAZA Integrative Orthologypollen tubeAT2G32460

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001005SANT/Myb domain
IPR016310Transcription factor GAMYB-like
IPR017930Myb domain
IPR009057Homeobox domain-like

Mapman id Description
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
No SignalP domains detected for this gene.