Gene: LOC_Os01g56190 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g56190
Transcript Identifier
LOC_Os01g56190.1
Gene Type
Coding gene
Location
Chr1 : 32350688-32359942 : positive

Family

Gene family
HOM04M000117
(742 genes in 29 species)
specific family
Subfamily
ORTHO04M006240
(37 genes in 28 species)
specific family

Descriptions

Description
HVT1, putative, expressed

Identifiers

Type Value
idLOC_Os01g56190.MSUv7.0
pacid33119784
tidLOC_Os01g56190.1.MSUv7.0
tidLOC_Os01g56190.1
RAPOs01g0767700

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Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005524 IEAInterProATP binding
GO:0004386 IEAInterProhelicase activity
GO:0005515 IEAInterProprotein binding
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G06670

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G06670

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR034083DExH-box ATP-dependent RNA helicase, R3H domain
IPR001374R3H domain
IPR011709Domain of unknown function DUF1605
IPR001650Helicase, C-terminal
IPR011545DEAD/DEAH box helicase domain
IPR007502Helicase-associated domain
IPR002110Ankyrin repeat
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR020683Ankyrin repeat-containing domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.