Gene: LOC_Os01g47740 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g47740
Transcript Identifier
LOC_Os01g47740.3
Gene Type
Coding gene
Location
Chr1 : 27303576-27307385 : negative

Family

Gene family
HOM04M000171
(531 genes in 29 species)
specific family
Subfamily
ORTHO04M000229
(315 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
zinc finger, C3HC4 type domain containing protein, expressed

Identifiers

Type Value
idLOC_Os01g47740.MSUv7.0
pacid33124456
tidLOC_Os01g47740.3.MSUv7.0
tidLOC_Os01g47740.3
RAPOs01g0667700

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0043161 IBAUniProtproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209 IBAUniProtprotein polyubiquitination
GO:0042787 IBAUniProtprotein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0060776 IEAPLAZA Integrative Orthologysimple leaf morphogenesisAT1G53190
GO:0016567 IEAPLAZA Integrative Orthologyprotein ubiquitinationAT1G53190

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0061630 IBAUniProtubiquitin protein ligase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G53190

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G53190

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.