Gene: LOC_Os01g45550 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g45550
Transcript Identifier
LOC_Os01g45550.2
Gene Type
Coding gene
Location
Chr1 : 25864067-25868014 : positive

Family

Gene family
HOM04M000306
(341 genes in 27 species)
specific family
Subfamily
ORTHO04M000219
(319 genes in 27 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
auxin efflux carrier component, putative, expressed

Identifiers

Type Value
idLOC_Os01g45550.MSUv7.0
pacid33126408
tidLOC_Os01g45550.2.MSUv7.0
tidLOC_Os01g45550.2
RAPOs01g0643300

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055085 IEAInterProtransmembrane transport
GO:0010252 IBAUniProtauxin homeostasis
GO:0009926 IMPUniProtauxin polar transport
GO:0009734 IEAUniProtauxin-activated signaling pathway
GO:0010082 IEAPLAZA Integrative Orthologyregulation of root meristem growthAT1G70940
GO:1901332 IEAPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G77110
GO:0007389 IEAPLAZA Integrative Orthologypattern specification processAT1G23080
GO:0048767 IEAPLAZA Integrative Orthologyroot hair elongationAT1G77110
GO:0048766 IEAPLAZA Integrative Orthologyroot hair initiationAT1G70940
GO:0009630 IEAPLAZA Integrative OrthologygravitropismAT1G70940
GO:0009416 IEAPLAZA Integrative Orthologyresponse to light stimulusAT1G70940
GO:0009942 IEAPLAZA Integrative Orthologylongitudinal axis specificationAT1G23080
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G23080
GO:0009606 IEAPLAZA Integrative OrthologytropismAT1G70940
GO:0009958 IEAPLAZA Integrative Orthologypositive gravitropismAT1G70940
GO:0010105 IEAPLAZA Integrative Orthologynegative regulation of ethylene-activated signaling pathwayAT1G77110
GO:0010315 IEAPLAZA Integrative Orthologyauxin effluxAT1G70940
GO:0010540 IEAPLAZA Integrative Orthologybasipetal auxin transportAT1G77110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0010329 IBAUniProtauxin efflux transmembrane transporter activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021 IEAUniProtintegral component of membrane
GO:0009921 IDAUniProtauxin efflux carrier complex
GO:0005783 IBAUniProtendoplasmic reticulum
GO:0016328 IEAPLAZA Integrative Orthologylateral plasma membraneAT1G70940
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G23080
GO:0009986 IEAPLAZA Integrative Orthologycell surfaceAT1G70940
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G23080
GO:0012506 IEAPLAZA Integrative Orthologyvesicle membraneAT1G70940
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G23080

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004776Membrane transport protein
IPR014024Auxin efflux carrier, plant type

Mapman id Description
11.2.4.1.1.Phytohormone action.auxin.transport.polar auxin transport.auxin transporter (PIN)
24.2.5.2.1.Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN)
No SignalP domains detected for this gene.