Gene: LOC_Os01g34350 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g34350
Transcript Identifier
LOC_Os01g34350.1
Gene Type
Coding gene
Location
Chr1 : 18940642-18945531 : negative

Family

Gene family
HOM04M000917
(149 genes in 27 species)
specific family
Subfamily
ORTHO04M004126
(48 genes in 26 species)
specific family

Descriptions

Description
RNA-dependent RNA polymerase, putative, expressed

Identifiers

Type Value
idLOC_Os01g34350.MSUv7.0
pacid33120980
tidLOC_Os01g34350.1.MSUv7.0
tidLOC_Os01g34350.1
RAPOs01g0527600

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010492 IMPUniProtmaintenance of shoot apical meristem identity
GO:0016246 IMPUniProtRNA interference
GO:0035196 IEAPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT3G49500
GO:0090065 IEAPLAZA Tree-based Orthologyregulation of production of siRNA involved in RNA interferenceSolyc04g014870.2
GO:0048440 IEAPLAZA Integrative Orthologycarpel developmentAT3G49500
GO:0009616 IEAPLAZA Integrative Orthologyvirus induced gene silencingAT3G49500
GO:0048467 IEAPLAZA Integrative Orthologygynoecium developmentAT3G49500
GO:0048544 IEAPLAZA Integrative Orthologyrecognition of pollenAT3G49500
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT3G49500
GO:0051607 IEAPLAZA Integrative Orthologydefense response to virusAT3G49500
GO:0031047 IEAPLAZA Integrative Orthologygene silencing by RNAAT3G49500
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT3G49500
GO:0030422 IEAPLAZA Integrative Orthologyproduction of siRNA involved in RNA interferenceAT3G49500
GO:0010267 IEAPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT3G49500

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003968 IEAUniProtRNA-directed 5'-3' RNA polymerase activity
GO:0003723 IEAUniProtRNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G49500

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR007855RNA-dependent RNA polymerase, eukaryotic-type

Mapman id Description
16.10.1.1.RNA processing.mRNA silencing.transacting siRNA pathway.ssRNA polymerase (RDR6)
No SignalP domains detected for this gene.