Gene: LOC_Os01g31610 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g31610
Transcript Identifier
LOC_Os01g31610.1
Gene Type
Coding gene
Location
Chr1 : 17302067-17303560 : positive

Family

Gene family
HOM04M005810
(35 genes in 29 species)
specific family

Descriptions

Description
tyrosyl-tRNA synthetase, putative, expressed

Identifiers

Type Value
idLOC_Os01g31610.MSUv7.0
pacid33126186
tidLOC_Os01g31610.1.MSUv7.0
tidLOC_Os01g31610.1
RAPOs01g0500900

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006437 RCA, IEAGene Ontologytyrosyl-tRNA aminoacylationGR_REF:8030
GO:0006418 IEAInterProtRNA aminoacylation for protein translation
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G02660

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004831 RCA, IEAGene Ontologytyrosine-tRNA ligase activityGR_REF:8030
GO:0005524 RCA, IEAGene OntologyATP bindingGR_REF:8030
GO:0003723 RCA, IEAGene OntologyRNA bindingGR_REF:8030
GO:0004812 RCA, IEAGene Ontologyaminoacyl-tRNA ligase activityGR_REF:8030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAInterProcytoplasm
GO:0005739 RCAGene OntologymitochondrionGR_REF:7047
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G02660
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G02660

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002307Tyrosine-tRNA ligase
IPR002942RNA-binding S4 domain
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR024107Tyrosine-tRNA ligase, bacterial-type, type 1
IPR024088Tyrosine-tRNA ligase, bacterial-type
IPR002305Aminoacyl-tRNA synthetase, class Ic
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site

Mapman id Description
17.2.21.Protein biosynthesis.aminoacyl-tRNA synthetase activities.tyrosine-tRNA ligase
No SignalP domains detected for this gene.