Gene: LOC_Os01g28450 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g28450
Transcript Identifier
LOC_Os01g28450.1
Gene Type
Coding gene
Location
Chr1 : 15934576-15935070 : positive

Family

Gene family
HOM04M000166
(544 genes in 28 species)
specific family
Subfamily
ORTHO04M000092
(535 genes in 28 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
SCP-like extracellular protein, expressed

Identifiers

Type Value
idLOC_Os01g28450.MSUv7.0
pacid33125819
tidLOC_Os01g28450.1.MSUv7.0
tidLOC_Os01g28450.1
RAPOs01g0382000

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010266 IEAPLAZA Integrative Orthologyresponse to vitamin B1AT2G14610
GO:0009627 IEAPLAZA Integrative Orthologysystemic acquired resistanceAT2G14610
GO:0009814 IEAPLAZA Integrative Orthologydefense response, incompatible interactionAT2G14580
GO:0009617 IEAPLAZA Integrative Orthologyresponse to bacteriumAT2G14580
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT2G14610
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT2G14580
GO:0006952 IEAPLAZA Integrative Orthologydefense responseAT2G14610
GO:0080027 IEAPLAZA Integrative Orthologyresponse to herbivoreAT2G14580
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT2G14580
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT2G14580
GO:0009611 IEAPLAZA Integrative Orthologyresponse to woundingAT2G14580
GO:1901001 IEAPLAZA Integrative Orthologynegative regulation of response to salt stressAT4G33730

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576 IEAInterProextracellular region
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT2G14610

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR034111Pathogenesis-related protein 1-like, SCP domain
IPR014044CAP domain
IPR001283Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413Ves allergen
IPR018244Allergen V5/Tpx-1-related, conserved site

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.