Gene: LOC_Os01g16530 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g16530
Transcript Identifier
LOC_Os01g16530.1
Gene Type
Coding gene
Location
Chr1 : 9379254-9383183 : negative

Family

Gene family
HOM04M000243
(404 genes in 29 species)
specific family
Subfamily
ORTHO04M001934
(81 genes in 29 species)
specific family

Descriptions

Description
OsClp1 - Putative Clp protease homologue, expressed

Identifiers

Type Value
idLOC_Os01g16530.MSUv7.0
pacid33121860
tidLOC_Os01g16530.1.MSUv7.0
tidLOC_Os01g16530.1
RAPOs01g0271400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508 IEAInterProproteolysis
GO:0000302 IEAPLAZA Integrative Orthologyresponse to reactive oxygen speciesAT4G17040
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT4G17040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004252 IEAInterProserine-type endopeptidase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 RCAGene OntologyplastidGR_REF:7047
GO:0009532 IEAPLAZA Integrative Orthologyplastid stromaAT4G17040
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT4G17040
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT4G17040
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT4G17040

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR001907ATP-dependent Clp protease proteolytic subunit
IPR029045ClpP/crotonase-like domain

Mapman id Description
19.4.2.9.2.Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.non-proteolytic core component ClpR
No SignalP domains detected for this gene.