Gene: LOC_Os01g07212 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g07212
Transcript Identifier
LOC_Os01g07212.1
Gene Type
Coding gene
Location
Chr1 : 3401288-3407358 : positive

Family

Gene family
HOM04M001869
(82 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
staphylococcal nuclease homologue, putative, expressed

Identifiers

Type Value
idLOC_Os01g07212.MSUv7.0
pacid33122861
tidLOC_Os01g07212.1.MSUv7.0
tidLOC_Os01g07212.1
RAPOs01g0166400

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006401 IEAPLAZA Tree-based OrthologyRNA catabolic processAT2G40410
GO:0006308 IEAPLAZA Tree-based OrthologyDNA catabolic processAT2G40410
GO:0090305 IEAPLAZA Tree-based Orthologynucleic acid phosphodiester bond hydrolysisAT3G56170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0017176 IEAInterProphosphatidylinositol N-acetylglucosaminyltransferase activity
GO:0004521 IEAPLAZA Tree-based Orthologyendoribonuclease activityAT2G40410
GO:0004520 IEAPLAZA Tree-based Orthologyendodeoxyribonuclease activityAT2G40410
GO:0004518 IEAPLAZA Tree-based Orthologynuclease activityAT3G56170

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019328GPI-GlcNAc transferase complex, PIG-H component, conserved domain
IPR016071Staphylococcal nuclease (SNase-like), OB-fold

Mapman id Description
18.3.4.1.1.3.Protein modification.lipidation.glycophosphatidylinositol (GPI) anchor addition.GPI pre-assembly.GPI N-acetylglucosamine transferase complex.component PIG-H
No SignalP domains detected for this gene.