Gene: LOC_Os01g04870 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g04870
Transcript Identifier
LOC_Os01g04870.1
Gene Type
Coding gene
Location
Chr1 : 2251104-2255000 : negative

Family

Gene family
HOM04M006433
(32 genes in 26 species)
specific family

Descriptions

Description
WD domain, G-beta repeat domain containing protein, expressed

Identifiers

Type Value
idLOC_Os01g04870.MSUv7.0
pacid33126679
tidLOC_Os01g04870.1.MSUv7.0
tidLOC_Os01g04870.1
RAPOs01g0141700

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281 IEAUniProtDNA repair
GO:0010224 IEAPLAZA Integrative Orthologyresponse to UV-BAT5G58760

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003676 RCA, IEAGene Ontologynucleic acid bindingGR_REF:8030
GO:0008270 IEAUniProtzinc ion binding
GO:0003684 IDA, IEA, UniProtdamaged DNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAUniProtnucleus
GO:0080008 IEAUniProtCul4-RING E3 ubiquitin ligase complex

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001878Zinc finger, CCHC-type
IPR033312DNA damage-binding protein 2
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
14.6.1.3.2.DNA damage response.nucleotide excision repair (NER).global genome nucleotide excision repair (GG-NER).UV-damaged DNA-binding protein (UV-DDB) heterodimer.component DDB2
No SignalP domains detected for this gene.