Gene: LOC_Os01g03020 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g03020
Transcript Identifier
LOC_Os01g03020.1
Gene Type
Coding gene
Location
Chr1 : 1146105-1155086 : negative

Family

Gene family
HOM04M003860
(45 genes in 28 species)
specific family
Subfamily
ORTHO04M005991
(38 genes in 28 species)
specific family

Descriptions

Description
tRNA synthetase class I, putative, expressed

Identifiers

Type Value
idLOC_Os01g03020.MSUv7.0
pacid33120857
tidLOC_Os01g03020.1.MSUv7.0
tidLOC_Os01g03020.1
RAPOs01g0120300

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006418 IEAInterProtRNA aminoacylation for protein translation
GO:0006429 IEAInterProleucyl-tRNA aminoacylation
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT4G04350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000166 IEAInterPronucleotide binding
GO:0004812 IEAInterProaminoacyl-tRNA ligase activity
GO:0005524 IEAInterProATP binding
GO:0004823 IEAInterProleucine-tRNA ligase activity
GO:0002161 IEAInterProaminoacyl-tRNA editing activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009536 RCAGene OntologyplastidGR_REF:7047
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT4G04350
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT4G04350
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT4G04350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
IPR002302Leucine-tRNA ligase
IPR025709Leucyl-tRNA synthetase, editing domain
IPR002300Aminoacyl-tRNA synthetase, class Ia
IPR013155Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site
IPR009008Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain

Mapman id Description
17.2.12.Protein biosynthesis.aminoacyl-tRNA synthetase activities.leucine-tRNA ligase
No SignalP domains detected for this gene.