Gene: GSVIVG01030511001 (Vitis vinifera)

Overview top

Gene Identifier
GSVIVG01030511001
Transcript Identifier
GSVIVT01030511001
Gene Type
Coding gene
Location
chr12 : 6341971-6351809 : negative

Family

Gene family
HOM04M000692
(187 genes in 29 species)
specific family
Subfamily
ORTHO04M000791
(143 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idGSVIVG01030511001.Genoscope12X
pacid17837000
tidGSVIVT01030511001.Genoscope12X
tidGSVIVT01030511001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010119 IEAPLAZA Integrative Orthologyregulation of stomatal movementAT2G32950
GO:0009649 IEAPLAZA Integrative Orthologyentrainment of circadian clockAT2G32950
GO:0046283 IEAPLAZA Integrative Orthologyanthocyanin-containing compound metabolic processAT2G32950
GO:0048573 IEAPLAZA Integrative Orthologyphotoperiodism, floweringAT2G32950
GO:0009647 IEAPLAZA Integrative OrthologyskotomorphogenesisAT2G32950
GO:0009641 IEAPLAZA Integrative Orthologyshade avoidanceAT2G32950
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT2G32950
GO:0006281 IEAPLAZA Integrative OrthologyDNA repairAT2G32950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT2G32950
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT2G32950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000152 IEAPLAZA Integrative Orthologynuclear ubiquitin ligase complexAT2G32950
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G32950
GO:0016604 IEAPLAZA Integrative Orthologynuclear bodyAT2G32950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR019775WD40 repeat, conserved site
IPR017907Zinc finger, RING-type, conserved site
IPR017986WD40-repeat-containing domain

Mapman id Description
18.4.16.Protein modification.phosphorylation.protein kinase (PEK)
19.2.2.8.3.4.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.COP1-SPA substrate adaptor subcomplex.component COP1
26.1.1.3.3.1.External stimuli response.light.red/far red light.CUL4-DDB1 ubiquitination complex.COP1-SPA substrate adaptor subcomplex.component COP1
No SignalP domains detected for this gene.