PLAZA 4.0 Monocots gene overview : GSVIVG01015506001

Gene: GSVIVG01015506001 (Vitis vinifera)

Overview

Gene Identifier: GSVIVG01015506001
Transcript Identifier: GSVIVT01015506001
Gene Type: Coding gene
Location: chr11 : 4311368-4313198 : negative

Family

Gene family: HOM04M000607
(205 genes in 29 species)
specific family
Subfamily: ORTHO04M001938
(81 genes in 24 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	GSVIVG01015506001.Genoscope12X
pacid	17826258
tid	GSVIVT01015506001.Genoscope12X
tid	GSVIVT01015506001

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0007017	IEA	InterPro	microtubule-based process

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0030286	IEA	InterPro	dynein complex

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001372	Dynein light chain, type 1/2

Mapman id	Description
35.2	not assigned.not annotated

No SignalP domains detected for this gene.