Gene: GSVIVG01008395001 (Vitis vinifera)

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Gene Identifier
GSVIVG01008395001
Transcript Identifier
GSVIVT01008395001
Gene Type
Coding gene
Location
chr17 : 2514165-2540667 : positive

Family

Gene family
HOM04M002403
(67 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idGSVIVG01008395001.Genoscope12X
pacid17821002
tidGSVIVT01008395001.Genoscope12X
tidGSVIVT01008395001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010476 IEAPLAZA Integrative Orthologygibberellin mediated signaling pathwayAT1G18080
GO:0050832 IEAPLAZA Tree-based Orthologydefense response to fungusLOC_Os01g49290
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G18080
GO:0071215 IEAPLAZA Integrative Orthologycellular response to abscisic acid stimulusAT1G48630
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT1G48630
GO:0009749 IEAPLAZA Integrative Orthologyresponse to glucoseAT1G18080
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G18080
GO:0006417 IEAPLAZA Integrative Orthologyregulation of translationAT1G48630
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT1G48630
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT1G48630
GO:0009967 IEAPLAZA Integrative Orthologypositive regulation of signal transductionAT1G48630
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G18080
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT3G18100
GO:0042254 IEAPLAZA Integrative Orthologyribosome biogenesisAT1G48630
GO:0060267 IEAPLAZA Tree-based Orthologypositive regulation of respiratory burstLOC_Os01g49290

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0003677 IEAInterProDNA binding
GO:0032947 IEAPLAZA Integrative Orthologyprotein complex scaffold activityAT1G18080
GO:0005078 IEAPLAZA Integrative OrthologyMAP-kinase scaffold activityAT1G48630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G48630
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G18080
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT1G18080
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G48630
GO:0005886 IEAPLAZA Tree-based Orthologyplasma membraneLOC_Os01g49290
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT3G18130
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT1G48630

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001680WD40 repeat
IPR001005SANT/Myb domain
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017930Myb domain
IPR017877Myb-like domain
IPR017986WD40-repeat-containing domain
IPR009057Homeobox domain-like

Mapman id Description
15.3.5.8.3.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.SNAP snRNA transcription factor complex.component SNAPC4
15.5.2.1.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)
17.1.3.1.33.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.associated component RACK1
No SignalP domains detected for this gene.