PLAZA 4.0 Monocots gene overview : EGU2755G0502

Gene: EGU2755G0502 (Elaeis guineensis)

Overview

Gene Identifier: EGU2755G0502
Transcript Identifier: EGU2755G0502.01
Gene Type: Coding gene
Location: NC_026007.1 : 12664151-12668195 : positive

Family

Gene family: HOM04M000032
(1726 genes in 27 species)
specific family
Subfamily: ORTHO04M000085
(562 genes in 27 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	gene21816
name	LOC105058170
name	XM_010941008.2
pid	XP_010939310.1
product	LRR receptor-like serine/threonine-protein kinase HSL2, transcript variant X1
tid	rna35262

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006468	IEA	InterPro	protein phosphorylation
GO:0010102	IEA	PLAZA Integrative Orthology	lateral root morphogenesis	AT5G65710
GO:0010468	IEA	PLAZA Integrative Orthology	regulation of gene expression	AT5G65710
GO:0048366	IEA	PLAZA Integrative Orthology	leaf development	AT5G65710

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004672	IEA	InterPro	protein kinase activity
GO:0005524	IEA	InterPro	ATP binding
GO:0005515	IEA	InterPro	protein binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR000719	Protein kinase domain
IPR001611	Leucine-rich repeat
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR025875	Leucine rich repeat 4
IPR017441	Protein kinase, ATP binding site
IPR008271	Serine/threonine-protein kinase, active site
IPR011009	Protein kinase-like domain

Mapman id	Description
11.10.1.5.2	.Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.IDL-peptide activity.IDA/IDL-peptide receptor (HAESA)
18.4.1.11	.Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-XI)

No SignalP domains detected for this gene.