PLAZA 4.0 Monocots gene overview : EGU2608G0003

Gene: EGU2608G0003 (Elaeis guineensis)

Overview

Gene Identifier: EGU2608G0003
Transcript Identifier: EGU2608G0003.01
Gene Type: Coding gene
Location: NW_011551143.1 : 175151-191016 : positive

Family

Gene family: HOM04M002059
(77 genes in 28 species)
specific family
Subfamily: ORTHO04M006289
(37 genes in 26 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	gene27132
name	LOC105034261
name	XM_010909337.2
pid	XP_010907639.2
product	phosphoglucan phosphatase DSP4, amyloplastic-like
tid	rna43672

Toolbox

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...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0005982	IEA	InterPro	starch metabolic process
GO:0007623	IEA	InterPro	circadian rhythm
GO:0016311	IEA	InterPro	dephosphorylation
GO:0005983	IEA	PLAZA Integrative Orthology	starch catabolic process	AT3G52180

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0019203	IEA	InterPro	carbohydrate phosphatase activity
GO:0008138	IEA	InterPro	protein tyrosine/serine/threonine phosphatase activity
GO:0016791	IEA	InterPro	phosphatase activity
GO:0030247	IEA	PLAZA Integrative Orthology	polysaccharide binding	AT3G52180
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT3G52180
GO:2001066	IEA	PLAZA Integrative Orthology	amylopectin binding	AT3G52180

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0009507	IEA	PLAZA Integrative Orthology	chloroplast	AT3G52180
GO:0009570	IEA	PLAZA Integrative Orthology	chloroplast stroma	AT3G52180

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR029021	Protein-tyrosine phosphatase-like
IPR030079	Phosphoglucan phosphatase DSP4
IPR000340	Dual specificity phosphatase, catalytic domain
IPR000387	Tyrosine specific protein phosphatases domain

Mapman id	Description
3.2.3.2.1	.Carbohydrate metabolism.starch metabolism.degradation.dephosphorylation.phosphoglucan phosphatase (SEX4)

No SignalP domains detected for this gene.