PLAZA 4.0 Monocots gene overview : EGU0935G0797

Gene: EGU0935G0797 (Elaeis guineensis)

Overview

Gene Identifier: EGU0935G0797
Transcript Identifier: EGU0935G0797.01
Gene Type: Coding gene
Location: NC_025995.1 : 24065918-24066874 : negative

Family

Gene family: HOM04M000058
(1253 genes in 29 species)
specific family
Subfamily: ORTHO04M000023
(1102 genes in 29 species)
specific family
Duplication type: Tandem duplicate and Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	gene6394
name	LOC105041583
name	XM_010918526.2
pid	XP_010916828.1
product	probable carboxylesterase 2
tid	rna10577

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0008152	IEA	InterPro	metabolic process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0016787	IEA	InterPro	hydrolase activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005829	IEA	PLAZA Integrative Orthology	cytosol	AT3G48700

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR029058	Alpha/Beta hydrolase fold
IPR013094	Alpha/beta hydrolase fold-3
IPR033140	Lipase, GDXG, putative serine active site

Mapman id	Description
35.1	not assigned.annotated

No SignalP domains detected for this gene.