PLAZA 4.0 Monocots gene overview : EGU0139G0186

Gene: EGU0139G0186 (Elaeis guineensis)

Overview

Gene Identifier: EGU0139G0186
Transcript Identifier: EGU0139G0186.01
Gene Type: Coding gene
Location: NC_026003.1 : 8331522-8333212 : negative

Family

Gene family: HOM04M000032
(1726 genes in 27 species)
specific family
Subfamily: ORTHO04M000178
(351 genes in 23 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type	Value
id	gene17597
name	LOC109506404
name	XM_019853643.1
pid	XP_019709202.1
product	MDIS1-interacting receptor like kinase 2-like
tid	rna28702

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0006468	IEA	PLAZA Homology (enrichment)	protein phosphorylation

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0004672	IEA	PLAZA Homology (enrichment)	protein kinase activity
GO:0005524	IEA	PLAZA Homology (enrichment)	ATP binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain, L domain-like
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type
IPR001611	Leucine-rich repeat
IPR025875	Leucine rich repeat 4

Mapman id	Description
35.1	not assigned.annotated

No SignalP domains detected for this gene.