Gene: Cre16.g673150 (Chlamydomonas reinhardtii)

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Gene Identifier
Cre16.g673150
Transcript Identifier
Cre16.g673150.t1.2
Gene Type
Coding gene
Location
chromosome_16 : 6481222-6484062 : negative

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasg16661.t1
idCre16.g673150.v5.5
pacid30777109
tidCre16.g673150.t1.2.v5.5
tidCre16.g673150.t1.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 IEAInterProhistone deacetylation
GO:2000026 IEAPLAZA Integrative Orthologyregulation of multicellular organismal developmentAT4G38130
GO:1990619 IEAPLAZA Integrative Orthologyhistone H3-K9 deacetylationAT3G44680
GO:0010431 IEAPLAZA Integrative Orthologyseed maturationAT5G63110
GO:0016573 IEAPLAZA Integrative Orthologyhistone acetylationAT4G38130
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT5G63110
GO:0016441 IEAPLAZA Integrative Orthologyposttranscriptional gene silencingAT5G63110
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G38130
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT5G63110
GO:1902459 IEAPLAZA Integrative Orthologypositive regulation of stem cell population maintenanceAT4G38130
GO:0009845 IEAPLAZA Integrative Orthologyseed germinationAT5G35600
GO:0009405 IEAPLAZA Integrative OrthologypathogenesisAT4G38130
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT5G35600
GO:0009861 IEAPLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistanceAT4G38130
GO:1900055 IEAPLAZA Integrative Orthologyregulation of leaf senescenceAT3G44680
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT5G63110
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G63110
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT3G44680
GO:0009294 IEAPLAZA Integrative OrthologyDNA mediated transformationAT4G38130
GO:0016458 IEAPLAZA Integrative Orthologygene silencingAT5G63110

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 IEAInterProhistone deacetylase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G63110
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G44680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G63110
GO:0000118 IEAPLAZA Integrative Orthologyhistone deacetylase complexAT4G38130
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT5G63110

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
12.3.2.1.4.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.HDA9-PWR deacetylation complex.component HDA9
No SignalP domains detected for this gene.