Gene: Cre12.g517400 (Chlamydomonas reinhardtii)

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Gene Identifier
Cre12.g517400
Transcript Identifier
Cre12.g517400.t1.2
Gene Type
Coding gene
Location
chromosome_12 : 4046869-4048114 : negative

Family

Gene family
HOM04M000036
(1581 genes in 29 species)
specific family
Subfamily
ORTHO04M001415
(97 genes in 28 species)
specific family

Descriptions

Description
Expressed Protein. Similar to the RabF/Rab5 type of small GTPase, involved in vesicle trafficking in the endosomal system; Found in the flagellar proteome [PMID: 15998802]. Previously annotated as RABF1
Small Rab-related GTPase

Identifiers

Type Value
aliasg12759.t1
idCre12.g517400.v5.5
pacid30793302
tidCre12.g517400.t1.2.v5.5
tidCre12.g517400.t1.2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048530 IEAPLAZA Integrative Orthologyfruit morphogenesisAT5G45130
GO:0009408 IEAPLAZA Integrative Orthologyresponse to heatAT5G45130
GO:0009958 IEAPLAZA Integrative Orthologypositive gravitropismAT5G45130
GO:0048364 IEAPLAZA Integrative Orthologyroot developmentAT5G45130
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT5G45130
GO:0048527 IEAPLAZA Integrative Orthologylateral root developmentAT5G45130
GO:0007034 IEAPLAZA Integrative Orthologyvacuolar transportAT5G45130

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003924 IEAInterProGTPase activity
GO:0005525 IEAInterProGTP binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G19640

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005768 IEAPLAZA Integrative OrthologyendosomeAT4G19640
GO:0005769 IEAPLAZA Integrative Orthologyearly endosomeAT4G19640
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G19640
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT5G45130
GO:0005783 IEAPLAZA Integrative Orthologyendoplasmic reticulumAT4G19640

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001806Small GTPase superfamily
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005225Small GTP-binding protein domain

Mapman id Description
22.8.1.6.Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.F-class RAB GTPase
No SignalP domains detected for this gene.