Gene: Cre12.g516500 (Chlamydomonas reinhardtii)

Overview top

Gene Identifier
Cre12.g516500
Transcript Identifier
Cre12.g516500.t1.1
Gene Type
Coding gene
Location
chromosome_12 : 3958081-3963222 : positive

Family

Gene family
HOM04M000392
(290 genes in 29 species)
specific family
Subfamily
ORTHO04M005522
(40 genes in 29 species)
specific family

Descriptions

Description
Ubiquitin ligase SCF complex subunit Cullin

Identifiers

Type Value
aliasg12740.t1
geneNameCUL2
idCre12.g516500.v5.5
pacid30793341
tidCre12.g516500.t1.1.v5.5
tidCre12.g516500.t1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAInterProubiquitin-dependent protein catabolic process
GO:0006281 IEAUniProtDNA repair
GO:0009755 IEAUniProthormone-mediated signaling pathway
GO:0048366 IEAUniProtleaf development
GO:0010100 IEAUniProtnegative regulation of photomorphogenesis
GO:0009640 IEAUniProtphotomorphogenesis
GO:0000209 IEAUniProtprotein polyubiquitination
GO:0042787 IBAUniProtprotein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0010182 IEAUniProtsugar mediated signaling pathway
GO:0048575 IEAPLAZA Integrative Orthologyshort-day photoperiodism, floweringAT5G46210
GO:0048825 IEAPLAZA Integrative Orthologycotyledon developmentAT5G46210
GO:0048367 IEAPLAZA Integrative Orthologyshoot system developmentAT5G46210
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT5G46210
GO:0010154 IEAPLAZA Integrative Orthologyfruit developmentAT5G46210

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625 IBA, IEAUniProtubiquitin protein ligase binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G46210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461 IEAInterProcullin-RING ubiquitin ligase complex
GO:0080008 IBAUniProtCul4-RING E3 ubiquitin ligase complex
GO:0005829 IEAUniProtcytosol
GO:0005634 IEAUniProtnucleus
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT5G46210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001373Cullin, N-terminal
IPR019559Cullin protein, neddylation domain
IPR016157Cullin, conserved site
IPR016158Cullin homology
IPR016159Cullin repeat-like-containing domain

Mapman id Description
19.2.2.8.3.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.CUL4-DDB1 ubiquitination complexes.scaffold component CUL4
26.1.1.3.1.External stimuli response.light.red/far red light.CUL4-DDB1 ubiquitination complex.scaffold component (CUL4)
No SignalP domains detected for this gene.