Gene: Cre06.g281050 (Chlamydomonas reinhardtii)

Overview top

Gene Identifier
Cre06.g281050
Transcript Identifier
Cre06.g281050.t1.2
Gene Type
Coding gene
Location
chromosome_6 : 5108577-5111982 : positive

Family

Gene family
HOM04M004860
(39 genes in 28 species)
specific family

Descriptions

Description
Expressed Protein. Similar to VPS5/SNX1, component of Retromer Coat complex involved in endosomal to Golgi trafficking.
Subunit of Retromer complex

Identifiers

Type Value
aliasg6536.t1
geneNameVPS5A
idCre06.g281050.v5.5
pacid30778806
tidCre06.g281050.t1.2.v5.5
tidCre06.g281050.t1.2

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0007034 IEAInterProvacuolar transport
GO:0010252 IEAUniProtauxin homeostasis
GO:0048364 IEAUniProtroot development
GO:0006897 IBAUniProtendocytosis
GO:0006896 IEAUniProtGolgi to vacuole transport
GO:0009958 IEAUniProtpositive gravitropism
GO:0006623 IEAUniProtprotein targeting to vacuole
GO:0016050 IBAUniProtvesicle organization
GO:0008333 IEAPLAZA Integrative Orthologyendosome to lysosome transportAT5G06140

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0035091 IBA, IEAUniProtphosphatidylinositol binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G06140

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030904 IEAUniProtretromer complex
GO:0005829 IEAUniProtcytosol
GO:0005768 IBAUniProtendosome
GO:0019898 IBAUniProtextrinsic component of membrane
GO:0043231 IEAUniProtintracellular membrane-bounded organelle
GO:0005771 IEAUniProtmultivesicular body
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G06140

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001683Phox homologous domain
IPR033241Sorting nexin 1, plant
IPR015404Sorting nexin Vps5-like, C-terminal
IPR027267Arfaptin homology (AH) domain/BAR domain

Mapman id Description
22.5.5.3.5.Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.component SNX1
No SignalP domains detected for this gene.