Gene: Cre03.g181300 (Chlamydomonas reinhardtii)
Overview 
- Gene Identifier
- Cre03.g181300
- Transcript Identifier
- Cre03.g181300.t1.2
- Gene Type
- Coding gene
- Location
- chromosome_3 : 5086935-5091056 : negative
Family
- Gene family
Descriptions
- Description
-
5-enolpyruvylshikimate-3-phosphate (EPSP) synthase (EC 2.5.1.19); predicted as mitochondrial by Target-P, but expected to be plastidic by homology. Catalyzes the sixth and penultimate step of the shikimate pathway (PMID: 12242393; PMID: 16963634). This
5-enolpyruvylshikimate-3-phosphate synthase
Identifiers
Type | Value |
---|---|
alias | g3757.t1 |
geneName | SHK6 |
id | Cre03.g181300.v5.5 |
pacid | 30786530 |
tid | Cre03.g181300.t1.2.v5.5 |
tid | Cre03.g181300.t1.2 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
Create
View
- ...sequences.
- ...the multiple sequence alignment of the gene family with BioJS
- ...BLAST hits against the PLAZA database.
- ...BLAST hits against NCBIs protein database.
- ...all colinear gene pairs.