Gene: Cre02.g090850 (Chlamydomonas reinhardtii)

Overview top

Gene Identifier
Cre02.g090850
Transcript Identifier
Cre02.g090850.t1.1
Gene Type
Coding gene
Location
chromosome_2 : 2340729-2347971 : positive

Family

Gene family
HOM04M000240
(407 genes in 29 species)
specific family
Subfamily
ORTHO04M002809
(63 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
ClpB chaperone, Hsp100 family
ClpB chaperone, Hsp100 family; probably chloroplastic or mitochondrial, by homology to At5g15450 and At2g25140 (PMID: 17144892)

Identifiers

Type Value
aliasg1698.t1
geneNameCLPB3
idCre02.g090850.v5.5
pacid30785159
tidCre02.g090850.t1.1.v5.5
tidCre02.g090850.t1.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019538 IEAInterProprotein metabolic process
GO:0009408 IEAUniProtresponse to heat
GO:0016485 IEAUniProtprotein processing
GO:0010380 IEAPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT5G50920
GO:0045036 IEAPLAZA Integrative Orthologyprotein targeting to chloroplastAT5G50920
GO:0045037 IEAPLAZA Integrative Orthologyprotein import into chloroplast stromaAT5G50920
GO:0009658 IEAPLAZA Integrative Orthologychloroplast organizationAT5G15450
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G50920
GO:0034214 IEAPLAZA Integrative Orthologyprotein hexamerizationAT3G48870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAUniProtATP binding
GO:0016887 IEAPLAZA Integrative OrthologyATPase activityAT3G48870
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT3G48870
GO:0004176 IEAPLAZA Integrative OrthologyATP-dependent peptidase activityAT5G50920
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G48870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAUniProtcytoplasm
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G15450
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT3G48870
GO:0009532 IEAPLAZA Integrative Orthologyplastid stromaAT5G15450
GO:0009536 IEAPLAZA Integrative OrthologyplastidAT3G48870
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT5G50920
GO:0009706 IEAPLAZA Integrative Orthologychloroplast inner membraneAT5G50920
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G15450
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT3G48870
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT3G48870
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G50920
GO:0031897 IEAPLAZA Integrative OrthologyTic complexAT5G50920

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004176Clp, N-terminal
IPR019489Clp ATPase, C-terminal
IPR003959ATPase, AAA-type, core
IPR001270ClpA/B family
IPR028299ClpA/B, conserved site 2
IPR018368ClpA/B, conserved site 1
IPR003593AAA+ ATPase domain
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR017730Chaperonin ClpB

Mapman id Description
26.4.2.4.External stimuli response.temperature.heat response.organellar chaperone (Clp-p|Clp-m)
No SignalP domains detected for this gene.