Gene: Bradi5g23700 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi5g23700
Transcript Identifier
Bradi5g23700.1
Gene Type
Coding gene
Location
Bd5 : 25712304-25717200 : positive

Family

Gene family
HOM04M000198
(472 genes in 28 species)
specific family
Subfamily
ORTHO04M000234
(309 genes in 28 species)
specific family

Descriptions

Description
intracellular cyclic nucleotide activated cation channel activity, voltage-gated potassium channel activity (Blast2GO)

Identifiers

Type Value
idBradi5g23700.v3.1
pacid32809565
tidBradi5g23700.1.v3.1
tidBradi5g23700.1
ancestorIdentifierBradi5g23700.v2.1
ancestorIdentifierBradi5g23700.1.v2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006811 IEAInterProion transport
GO:0055085 IEAInterProtransmembrane transport
GO:0006813 IEAInterPropotassium ion transport
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G15990
GO:0009860 IEAPLAZA Integrative Orthologypollen tube growthAT1G15990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005216 IEAInterProion channel activity
GO:0005249 IEAInterProvoltage-gated potassium channel activity
GO:0005515 IEAInterProprotein binding
GO:0005223 IEAPLAZA Integrative Orthologyintracellular cGMP activated cation channel activityAT2G23980
GO:0005262 IEAPLAZA Integrative Orthologycalcium channel activityAT5G57940
GO:0005516 IEAPLAZA Integrative Orthologycalmodulin bindingAT4G30560

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAInterPromembrane
GO:0071944 IEAPLAZA Integrative Orthologycell peripheryAT2G23980
GO:0090406 IEAPLAZA Integrative Orthologypollen tubeAT1G15990
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G15990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR014710RmlC-like jelly roll fold
IPR005821Ion transport domain
IPR000595Cyclic nucleotide-binding domain
IPR003938Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR000048IQ motif, EF-hand binding site
IPR018490Cyclic nucleotide-binding-like

Mapman id Description
24.3.2.4.Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)
No SignalP domains detected for this gene.