Gene: Bradi5g01430 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi5g01430
Transcript Identifier
Bradi5g01430.1
Gene Type
Coding gene
Location
Bd5 : 1406501-1410207 : positive

Family

Gene family
HOM04M001025
(135 genes in 29 species)
specific family
Subfamily
ORTHO04M001689
(88 genes in 28 species)
specific family

Descriptions

Description
Encodes a putative serine-arginine rich RNA binding protein. Contains two RNA recognition motifs (InterPro domain IPR000504) of PF00076 protein family (RRM_1). Shares sequence similarity with Arabidopsis thaliana splicing factor ATRSP31 (AT3G61860). Conta

Identifiers

Type Value
idBradi5g01430.v3.1
pacid32811367
tidBradi5g01430.1.v3.1
tidBradi5g01430.1
ancestorIdentifierBradi5g01430.v2.1
ancestorIdentifierBradi5g01430.1.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000398 IEAPLAZA Integrative OrthologymRNA splicing, via spliceosomeAT3G61860

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G46610

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005681 IEAPLAZA Integrative Orthologyspliceosomal complexAT3G61860
GO:0016607 IEAPLAZA Integrative Orthologynuclear speckAT3G61860

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000504RNA recognition motif domain

Mapman id Description
16.4.6.3.RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31|40|41)
No SignalP domains detected for this gene.