Gene: Bradi4g20480 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi4g20480
Transcript Identifier
Bradi4g20480.4
Gene Type
Coding gene
Location
Bd4 : 23416969-23423363 : negative

Family

Gene family
HOM04M005219
(37 genes in 28 species)
specific family

Descriptions

Description
8-oxo-7,8-dihydroguanine DNA N-glycosylase activity, 5-hydroxymethyluracil DNA N-glycosylase activity, 5-formyluracil DNA N-glycosylase activity (Blast2GO)

Identifiers

Type Value
idBradi4g20480.v3.1
pacid32787322
tidBradi4g20480.4.v3.1
tidBradi4g20480.4
ancestorIdentifierBradi4g20480.v2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006284 IEAInterProbase-excision repair
GO:0006281 IEAInterProDNA repair
GO:0006285 IEAInterProbase-excision repair, AP site formation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003906 IEAInterProDNA-(apurinic or apyrimidinic site) lyase activity
GO:0019104 IEAInterProDNA N-glycosylase activity
GO:0003677 IEAInterProDNA binding
GO:0051539 IEAInterPro4 iron, 4 sulfur cluster binding
GO:0003824 IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAInterPronucleus
GO:0042644 IEAPLAZA Integrative Orthologychloroplast nucleoidAT2G31450

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003265HhH-GPD domain
IPR023170Helix-turn-helix, base-excision DNA repair, C-terminal
IPR030841Endonuclease III-like protein 1
IPR000445Helix-hairpin-helix motif
IPR004035Endonuclease III, iron-sulphur binding site
IPR003651Endonuclease III-like, iron-sulphur cluster loop motif
IPR011257DNA glycosylase

Mapman id Description
14.5.11.DNA damage response.base excision repair (BER).bifunctional glycosylase-lyase and endonuclease (NTH)
No SignalP domains detected for this gene.