Gene: Bradi4g08350 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi4g08350
Transcript Identifier
Bradi4g08350.1
Gene Type
Coding gene
Location
Bd4 : 7408504-7413601 : positive

Family

Gene family
HOM04M004079
(44 genes in 29 species)
specific family

Descriptions

Description
DNA-directed RNA polymerase activity (Blast2GO)

Identifiers

Type Value
idBradi4g08350.v3.1
pacid32786195
tidBradi4g08350.1.v3.1
tidBradi4g08350.1
ancestorIdentifierBradi4g08350.v2.1
ancestorIdentifierBradi4g08350.1.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351 IEAInterProtranscription, DNA-templated
GO:0010375 IEAPLAZA Integrative Orthologystomatal complex patterningAT2G15430
GO:0010374 IEAPLAZA Integrative Orthologystomatal complex developmentAT2G15430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003899 IEAInterProDNA-directed 5'-3' RNA polymerase activity
GO:0046983 IEAInterProprotein dimerization activity
GO:0003677 IEAInterProDNA binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G15400

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005665 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase II, core complexAT2G15400
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G15430
GO:0000418 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase IV complexAT2G15400
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT2G15430
GO:0000419 IEAPLAZA Integrative OrthologyDNA-directed RNA polymerase V complexAT2G15400
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT2G15430

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-type
IPR011262DNA-directed RNA polymerase, insert domain
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
IPR009025DNA-directed RNA polymerase, RBP11-like dimerisation domain

Mapman id Description
15.1.6.1.RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol I-V shared regulatory components.subunit 3
No SignalP domains detected for this gene.