Gene: Bradi4g07997 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi4g07997
Transcript Identifier
Bradi4g07997.2
Gene Type
Coding gene
Location
Bd4 : 6959679-6973982 : positive

Family

Gene family
HOM04M000701
(185 genes in 29 species)
specific family
Subfamily
ORTHO04M002347
(72 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idBradi4g07997.v3.1
pacid32784764
tidBradi4g07997.2.v3.1
tidBradi4g07997.2
ancestorIdentifierBradi4g07997.v2.1
ancestorIdentifierBradi4g07997.2.v2.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511 IEAPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G70320

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842 IEAInterProubiquitin-protein transferase activity
GO:0005488 IEAInterProbinding
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G70320
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT1G55860
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT1G70320
GO:0000151 IEAPLAZA Integrative Orthologyubiquitin ligase complexAT1G70320
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G55860
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G70320

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000569HECT domain
IPR011989Armadillo-like helical
IPR015940Ubiquitin-associated domain
IPR010314E3 ubiquitin ligase, domain of unknown function DUF913
IPR010309E3 ubiquitin ligase, domain of unknown function DUF908
IPR025527Domain of unknown function DUF4414
IPR003903Ubiquitin interacting motif
IPR016024Armadillo-type fold
IPR009060UBA-like

Mapman id Description
19.2.2.1.5.1.1.Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.HECT-type E3 ligase activities.monomeric E3 ubiquitin ligase (HECT)
No SignalP domains detected for this gene.