Gene: Bradi4g05897 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi4g05897
Transcript Identifier
Bradi4g05897.1
Gene Type
Coding gene
Location
Bd4 : 4886232-4890449 : positive

Family

Gene family
HOM04M001860
(82 genes in 29 species)
specific family
Subfamily
ORTHO04M003024
(60 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idBradi4g05897.v3.1
pacid32787281
tidBradi4g05897.1.v3.1
tidBradi4g05897.1
ancestorIdentifierBradi4g05897.v2.1
ancestorIdentifierBradi4g05897.1.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114 IEAInterProoxidation-reduction process
GO:0019632 IEAInterProshikimate metabolic process
GO:0009793 IEAPLAZA Integrative Orthologyembryo development ending in seed dormancyAT3G06350

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003855 IEAInterPro3-dehydroquinate dehydratase activity
GO:0003824 IEAInterProcatalytic activity
GO:0004764 IEAInterProshikimate 3-dehydrogenase (NADP+) activity
GO:0050661 IEAInterProNADP binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT3G06350
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT3G06350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR0013813-dehydroquinate dehydratase type I
IPR013785Aldolase-type TIM barrel
IPR022893Shikimate dehydrogenase family
IPR013708Shikimate dehydrogenase substrate binding, N-terminal
IPR006151Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
IPR016040NAD(P)-binding domain
IPR011342Shikimate dehydrogenase

Mapman id Description
4.1.5.1.3.Amino acid metabolism.biosynthesis.shikimate family.shikimate pathway.3-dehydroquinate dehydratase and shikimate dehydrogenase
No SignalP domains detected for this gene.