Gene: Bradi2g20440 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi2g20440
Transcript Identifier
Bradi2g20440.3
Gene Type
Coding gene
Location
Bd2 : 17930150-17931417 : negative

Family

Gene family
HOM04M000254
(386 genes in 29 species)
specific family
Subfamily
ORTHO04M000463
(203 genes in 29 species)
specific family

Descriptions

Description
procollagen-proline 4-dioxygenase activity (Blast2GO)

Identifiers

Type Value
idBradi2g20440.v3.1
pacid32774142
tidBradi2g20440.3.v3.1
tidBradi2g20440.3
ancestorIdentifierBradi2g20440.v2.1
ancestorIdentifierBradi2g20440.3.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006662 IEAInterProglycerol ether metabolic process
GO:0045454 IEAInterProcell redox homeostasis
GO:0051259 IEAPLAZA Integrative Orthologyprotein oligomerizationAT5G42980
GO:0010188 IEAPLAZA Integrative Orthologyresponse to microbial phytotoxinAT1G45145
GO:0055114 IEAPLAZA Integrative Orthologyoxidation-reduction processAT1G45145
GO:0043085 IEAPLAZA Integrative Orthologypositive regulation of catalytic activityAT3G51030
GO:0006457 IEAPLAZA Integrative Orthologyprotein foldingAT5G42980
GO:0042542 IEAPLAZA Integrative Orthologyresponse to hydrogen peroxideAT5G42980
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G45145
GO:0006355 IEAPLAZA Integrative Orthologyregulation of transcription, DNA-templatedAT3G51030
GO:0010093 IEAPLAZA Integrative Orthologyspecification of floral organ identityAT3G51030
GO:0051568 IEAPLAZA Integrative Orthologyhistone H3-K4 methylationAT3G51030
GO:0050832 IEAPLAZA Integrative Orthologydefense response to fungusAT1G45145
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT3G51030
GO:0009408 IEAPLAZA Integrative Orthologyresponse to heatAT5G42980
GO:0006979 IEAPLAZA Integrative Orthologyresponse to oxidative stressAT1G45145
GO:0009735 IEAPLAZA Integrative Orthologyresponse to cytokininAT5G42980
GO:0010286 IEAPLAZA Integrative Orthologyheat acclimationAT5G42980

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0015035 IEAInterProprotein disulfide oxidoreductase activity
GO:0018024 IEAPLAZA Integrative Orthologyhistone-lysine N-methyltransferase activityAT3G51030
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G42980
GO:0016671 IEAPLAZA Integrative Orthologyoxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptorAT1G45145
GO:0010314 IEAPLAZA Integrative Orthologyphosphatidylinositol-5-phosphate bindingAT3G51030
GO:0008047 IEAPLAZA Integrative Orthologyenzyme activator activityAT3G51030
GO:0044212 IEAPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT3G51030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT5G42980
GO:0005739 IEAPLAZA Integrative OrthologymitochondrionAT5G42980
GO:0005618 IEAPLAZA Integrative Orthologycell wallAT5G42980
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G51030
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT1G45145
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G51030
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT1G45145
GO:0048046 IEAPLAZA Integrative OrthologyapoplastAT1G45145
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT1G45145
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G42980
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT5G42980
GO:0005794 IEAPLAZA Integrative OrthologyGolgi apparatusAT5G42980
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT5G42980

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005746Thioredoxin
IPR013766Thioredoxin domain
IPR017937Thioredoxin, conserved site
IPR012336Thioredoxin-like fold

Mapman id Description
10.6.1.Redox homeostasis.cytosol/mitochondrion/nucleus redox homeostasis.H-type thioredoxin
18.7.2.Protein modification.S-nitrosylation.protein-S-nitrosothiol reductase (TRX5)
No SignalP domains detected for this gene.