Gene: Bradi1g29590 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi1g29590
Transcript Identifier
Bradi1g29590.3
Gene Type
Coding gene
Location
Bd1 : 25178329-25181181 : positive

Family

Gene family
HOM04M001399
(105 genes in 29 species)
specific family
Subfamily
ORTHO04M001915
(82 genes in 29 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idBradi1g29590.v3.1
pacid32800914
tidBradi1g29590.3.v3.1
tidBradi1g29590.3
ancestorIdentifierBradi1g29590.v2.1
ancestorIdentifierBradi1g29590.3.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006696 IEAInterProergosterol biosynthetic process
GO:0009058 IEAInterProbiosynthetic process
GO:0016117 IEAPLAZA Integrative Orthologycarotenoid biosynthetic processAT5G17230

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004310 IEAInterProfarnesyl-diphosphate farnesyltransferase activity
GO:0051996 IEAInterProsqualene synthase activity
GO:0016740 IEAInterProtransferase activity
GO:0016765 IEAInterProtransferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0046905 IEAPLAZA Integrative Orthologyphytoene synthase activityAT5G17230
GO:0016767 IEAPLAZA Integrative Orthologygeranylgeranyl-diphosphate geranylgeranyltransferase activityAT5G17230
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT5G17230

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT5G17230
GO:0010287 IEAPLAZA Integrative OrthologyplastoglobuleAT5G17230

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033904Trans-Isoprenyl Diphosphate Synthases, head-to-head
IPR008949Isoprenoid synthase domain
IPR002060Squalene/phytoene synthase
IPR019845Squalene/phytoene synthase, conserved site

Mapman id Description
9.1.6.1.1.Secondary metabolism.terpenoids.carotenoid biosynthesis.carotenes.phytoene synthase (PSY)
No SignalP domains detected for this gene.