Gene: Bradi1g10510 (Brachypodium distachyon)

Overview top

Gene Identifier
Bradi1g10510
Transcript Identifier
Bradi1g10510.1
Gene Type
Coding gene
Location
Bd1 : 7584195-7592552 : negative

Family

Gene family
HOM04M001168
(122 genes in 27 species)
specific family
Subfamily
ORTHO04M001284
(103 genes in 27 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
two-component sensor activity (Blast2GO)

Identifiers

Type Value
idBradi1g10510.v3.1
pacid32805153
tidBradi1g10510.1.v3.1
tidBradi1g10510.1
ancestorIdentifierBradi1g10510.v2.1
ancestorIdentifierBradi1g10510.1.v2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009584 IEAInterProdetection of visible light
GO:0018298 IEAInterProprotein-chromophore linkage
GO:0007165 IEAInterProsignal transduction
GO:0010201 IEAPLAZA Integrative Orthologyresponse to continuous far red light stimulus by the high-irradiance response systemAT1G09570
GO:0010202 IEAPLAZA Tree-based Orthologyresponse to low fluence red light stimulusAT2G18790
GO:2000028 IEAPLAZA Tree-based Orthologyregulation of photoperiodism, floweringAT2G18790
GO:0010244 IEAPLAZA Tree-based Orthologyresponse to low fluence blue light stimulus by blue low-fluence systemAT2G18790
GO:0031347 IEAPLAZA Tree-based Orthologyregulation of defense responseAT2G18790
GO:0010029 IEAPLAZA Tree-based Orthologyregulation of seed germinationAT2G18790
GO:0015979 IEAPLAZA Tree-based OrthologyphotosynthesisAT2G18790
GO:0017012 IEAPLAZA Tree-based Orthologyprotein-phytochromobilin linkageAT2G18790
GO:0010148 IEAPLAZA Tree-based OrthologytranspirationAT2G18790
GO:0010203 IEAPLAZA Integrative Orthologyresponse to very low fluence red light stimulusAT1G09570
GO:0009638 IEAPLAZA Integrative OrthologyphototropismAT1G09570
GO:0009867 IEAPLAZA Tree-based Orthologyjasmonic acid mediated signaling pathwayAT2G18790
GO:0009687 IEAPLAZA Tree-based Orthologyabscisic acid metabolic processAT2G18790
GO:0000724 IEAPLAZA Tree-based Orthologydouble-strand break repair via homologous recombinationLOC_Os03g54084
GO:0009585 IEAPLAZA Homology (enrichment)red, far-red light phototransduction
GO:0009266 IEAPLAZA Tree-based Orthologyresponse to temperature stimulusAT2G18790
GO:0009640 IEAPLAZA Integrative OrthologyphotomorphogenesisAT1G09570
GO:0010374 IEAPLAZA Tree-based Orthologystomatal complex developmentAT2G18790
GO:0017006 IEAPLAZA Homology (enrichment)protein-tetrapyrrole linkage
GO:0017148 IEAPLAZA Integrative Orthologynegative regulation of translationAT1G09570
GO:0010017 IEAPLAZA Tree-based Orthologyred or far-red light signaling pathwayAT4G16250
GO:0046685 IEAPLAZA Integrative Orthologyresponse to arsenic-containing substanceAT1G09570
GO:0010617 IEAPLAZA Tree-based Orthologycircadian regulation of calcium ion oscillationAT2G18790
GO:0010218 IEAPLAZA Integrative Orthologyresponse to far red lightAT1G09570
GO:0045892 IEAPLAZA Tree-based Orthologynegative regulation of transcription, DNA-templatedAT2G18790
GO:0009649 IEAPLAZA Tree-based Orthologyentrainment of circadian clockAT2G18790
GO:0009409 IEAPLAZA Tree-based Orthologyresponse to coldAT2G18790
GO:0009630 IEAPLAZA Integrative OrthologygravitropismAT1G09570
GO:0006325 IEAPLAZA Tree-based Orthologychromatin organizationAT2G18790
GO:0010161 IEAPLAZA Integrative Orthologyred light signaling pathwayAT1G09570
GO:0007131 IEAPLAZA Tree-based Orthologyreciprocal meiotic recombinationLOC_Os03g54084

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0000155 IEAInterProphosphorelay sensor kinase activity
GO:0009883 IEAPLAZA Integrative Orthologyred or far-red light photoreceptor activityAT1G09570
GO:0004672 IEAPLAZA Integrative Orthologyprotein kinase activityAT1G09570
GO:0009881 IEAPLAZA Homology (enrichment)photoreceptor activity
GO:0042803 IEAPLAZA Tree-based Orthologyprotein homodimerization activityAT2G18790
GO:0042802 IEAPLAZA Integrative Orthologyidentical protein bindingAT1G09570
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT1G09570
GO:1990841 IEAPLAZA Tree-based Orthologypromoter-specific chromatin bindingAT2G18790
GO:0031517 IEAPLAZA Tree-based Orthologyred light photoreceptor activityAT2G18790
GO:0031516 IEAPLAZA Integrative Orthologyfar-red light photoreceptor activityAT1G09570
GO:0043565 IEAPLAZA Tree-based Orthologysequence-specific DNA bindingAT2G18790

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT1G09570
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G09570
GO:0005829 IEAPLAZA Tree-based OrthologycytosolAT2G18790
GO:0016604 IEAPLAZA Integrative Orthologynuclear bodyAT1G09570

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR000014PAS domain
IPR029016GAF domain-like
IPR013515Phytochrome, central region
IPR003018GAF domain
IPR013654PAS fold-2
IPR013767PAS fold
IPR001294Phytochrome
IPR016132Phytochrome chromophore attachment domain
IPR003661Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

Mapman id Description
26.1.1.1.External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)
No SignalP domains detected for this gene.