Gene: Aco029182 (Ananas comosus)

Overview top

Gene Identifier
Aco029182
Transcript Identifier
Aco029182.1
Gene Type
Coding gene
Location
scaffold_850 : 46939-48267 : positive

Family

Gene family
HOM04M000833
(160 genes in 27 species)
specific family
Subfamily
ORTHO04M000717
(154 genes in 27 species)
specific family

Descriptions

Description
SHI-related sequence 5

Identifiers

Type Value
idAco029182.v3
pacid33043227
tidAco029182.1.v3
tidAco029182.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0048480 IEAPLAZA Integrative Orthologystigma developmentAT3G51060
GO:0045893 IEAPLAZA Integrative Orthologypositive regulation of transcription, DNA-templatedAT3G51060
GO:0048467 IEAPLAZA Integrative Orthologygynoecium developmentAT1G75520
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT5G66350
GO:0048364 IEAPLAZA Tree-based Orthologyroot developmentAT5G12330
GO:0009938 IEAPLAZA Integrative Orthologynegative regulation of gibberellic acid mediated signaling pathwayAT5G66350
GO:0009733 IEAPLAZA Tree-based Orthologyresponse to auxinAT5G12330
GO:0048479 IEAPLAZA Integrative Orthologystyle developmentAT3G51060
GO:0010051 IEAPLAZA Integrative Orthologyxylem and phloem pattern formationAT3G51060
GO:0009740 IEAPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT5G66350
GO:0009299 IEAPLAZA Integrative OrthologymRNA transcriptionAT1G19790
GO:0010252 IEAPLAZA Integrative Orthologyauxin homeostasisAT3G51060

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding
GO:0046982 IEAPLAZA Integrative Orthologyprotein heterodimerization activityAT5G66350
GO:0003700 IEAPLAZA Integrative Orthologytranscription factor activity, sequence-specific DNA bindingAT5G66350
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT3G51060
GO:0042803 IEAPLAZA Tree-based Orthologyprotein homodimerization activityAT5G12330

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G66350

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR007818SHI protein family
IPR006511SHORT INTERNODES, C-terminal
IPR006510Zinc finger, lateral root primordium type 1

Mapman id Description
15.5.47.RNA biosynthesis.transcriptional regulation.transcription factor (SRS)
No SignalP domains detected for this gene.