PLAZA 4.0 Monocots gene overview : Aco027878

Gene: Aco027878 (Ananas comosus)

Overview

Gene Identifier: Aco027878
Transcript Identifier: Aco027878.1
Gene Type: Coding gene
Location: scaffold_1163 : 2928-4952 : negative

Family

Gene family: HOM04M002842
(58 genes in 29 species)
specific family

Descriptions

Description: Vacuolar protein-sorting-associated protein-like protein

Identifiers

Type	Value
id	Aco027878.v3
pacid	33041992
tid	Aco027878.1.v3
tid	Aco027878.1

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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View

Browse

...the gene in IGV.js, a genome browser

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	PLAZA Integrative Orthology	protein binding	AT3G53120

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR009851	Modifier of rudimentary, Modr

Mapman id	Description
22.5.4.1.3	.Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.component VPS37

No SignalP domains detected for this gene.