Gene: Aco023980 (Ananas comosus)

Overview top

Gene Identifier
Aco023980
Transcript Identifier
Aco023980.1
Gene Type
Coding gene
Location
LG10 : 7036851-7070112 : negative

Family

Gene family
HOM04M000678
(189 genes in 29 species)
specific family
Subfamily
ORTHO04M005152
(42 genes in 29 species)
specific family

Descriptions

Description
DNA mismatch repair protein MutS

Identifiers

Type Value
idAco023980.v3
pacid33046822
tidAco023980.1.v3
tidAco023980.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006298 IEAInterPromismatch repair
GO:0045128 IEAPLAZA Integrative Orthologynegative regulation of reciprocal meiotic recombinationAT3G18524
GO:0006290 IEAPLAZA Integrative Orthologypyrimidine dimer repairAT3G18524

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005524 IEAInterProATP binding
GO:0030983 IEAInterPromismatched DNA binding
GO:0003677 IEAInterProDNA binding
GO:0003684 IEAPLAZA Integrative Orthologydamaged DNA bindingAT3G18524
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT3G18524

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0032300 IEAInterPromismatch repair complex
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT3G18524

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007860DNA mismatch repair protein MutS, connector domain
IPR016151DNA mismatch repair protein MutS, N-terminal
IPR032642DNA mismatch repair protein Msh2
IPR000432DNA mismatch repair protein MutS, C-terminal
IPR007861DNA mismatch repair protein MutS, clamp
IPR007696DNA mismatch repair protein MutS, core
IPR007695DNA mismatch repair protein MutS-like, N-terminal
IPR011184DNA mismatch repair MutS
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
14.7.1.1.DNA damage response.mismatch repair (MMR).MSH2-x mismatch repair heterodimer components.component MSH2
No SignalP domains detected for this gene.