Gene: Aco016650 (Ananas comosus)

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Gene Identifier
Aco016650
Transcript Identifier
Aco016650.1
Gene Type
Coding gene
Location
LG08 : 10731630-10740319 : positive

Family

Gene family
HOM04M000371
(307 genes in 28 species)
specific family
Subfamily
ORTHO04M000440
(210 genes in 28 species)
specific family

Descriptions

Description
Ribonuclease 3-like protein

Identifiers

Type Value
idAco016650.v3
pacid33035499
tidAco016650.1.v3
tidAco016650.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006396 IEAInterProRNA processing
GO:0010267 IEAPLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interferenceAT1G01040
GO:0035279 IEAPLAZA Integrative OrthologymRNA cleavage involved in gene silencing by miRNAAT1G01040
GO:0010228 IEAPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT1G01040
GO:2000034 IEAPLAZA Integrative Orthologyregulation of seed maturationAT1G01040
GO:0010599 IEAPLAZA Integrative Orthologyproduction of lsiRNA involved in RNA interferenceAT1G01040
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT1G01040
GO:0009616 IEAPLAZA Integrative Orthologyvirus induced gene silencingAT1G01040
GO:0048317 IEAPLAZA Integrative Orthologyseed morphogenesisAT1G01040
GO:0000911 IEAPLAZA Integrative Orthologycytokinesis by cell plate formationAT1G01040
GO:0009880 IEAPLAZA Integrative Orthologyembryonic pattern specificationAT1G01040
GO:0035196 IEAPLAZA Integrative Orthologyproduction of miRNAs involved in gene silencing by miRNAAT1G01040
GO:0031053 IEAPLAZA Integrative Orthologyprimary miRNA processingAT1G01040
GO:0010098 IEAPLAZA Integrative Orthologysuspensor developmentAT1G01040

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004525 IEAInterProribonuclease III activity
GO:0005515 IEAInterProprotein binding
GO:0016891 IEAInterProendoribonuclease activity, producing 5'-phosphomonoesters
GO:0003725 IEAPLAZA Integrative Orthologydouble-stranded RNA bindingAT1G01040

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0010445 IEAPLAZA Integrative Orthologynuclear dicing bodyAT1G01040
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G01040

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000999Ribonuclease III domain
IPR001650Helicase, C-terminal
IPR014720Double-stranded RNA-binding domain
IPR003100PAZ domain
IPR005034Dicer dimerisation domain
IPR014001Helicase superfamily 1/2, ATP-binding domain
IPR027417P-loop containing nucleoside triphosphate hydrolase

Mapman id Description
16.10.2.1.1.RNA processing.mRNA silencing.miRNA pathway.DCL1-HYL1 miRNA biogenesis complex.endoribonuclease component DCL1
No SignalP domains detected for this gene.