Gene: Aco014373 (Ananas comosus)

Overview top

Gene Identifier
Aco014373
Transcript Identifier
Aco014373.1
Gene Type
Coding gene
Location
LG05 : 813433-817989 : positive

Family

Gene family
HOM04M000721
(181 genes in 29 species)
specific family
Subfamily
ORTHO04M000710
(155 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
histone deacetylase 1

Identifiers

Type Value
idAco014373.v3
pacid33053726
tidAco014373.1.v3
tidAco014373.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016575 IEAInterProhistone deacetylation
GO:2000026 IEAPLAZA Integrative Orthologyregulation of multicellular organismal developmentAT4G38130
GO:1990619 IEAPLAZA Integrative Orthologyhistone H3-K9 deacetylationAT3G44680
GO:0016573 IEAPLAZA Integrative Orthologyhistone acetylationAT4G38130
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT4G38130
GO:1902459 IEAPLAZA Integrative Orthologypositive regulation of stem cell population maintenanceAT4G38130
GO:0009405 IEAPLAZA Integrative OrthologypathogenesisAT4G38130
GO:0009861 IEAPLAZA Integrative Orthologyjasmonic acid and ethylene-dependent systemic resistanceAT4G38130
GO:1900055 IEAPLAZA Integrative Orthologyregulation of leaf senescenceAT3G44680
GO:0009294 IEAPLAZA Integrative OrthologyDNA mediated transformationAT4G38130
GO:0010187 IEAPLAZA Integrative Orthologynegative regulation of seed germinationAT3G44680

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004407 IEAInterProhistone deacetylase activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G38130
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT3G44680

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT4G38130
GO:0000118 IEAPLAZA Integrative Orthologyhistone deacetylase complexAT4G38130

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR023801Histone deacetylase domain
IPR000286Histone deacetylase superfamily
IPR003084Histone deacetylase

Mapman id Description
12.3.2.1.1.Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase
12.3.2.4.1.Chromatin organisation.histone modifications.histone deacetylation.SNL-HDA19 histone deacetylase complex.deacetylase component HDA19
No SignalP domains detected for this gene.