Gene: Aco013123 (Ananas comosus)

Overview top

Gene Identifier
Aco013123
Transcript Identifier
Aco013123.1
Gene Type
Coding gene
Location
LG25 : 338603-341801 : negative

Family

Gene family
HOM04M001153
(123 genes in 29 species)
specific family
Subfamily
ORTHO04M001548
(93 genes in 29 species)
specific family

Descriptions

Description
Transcription initiation factor IIB

Identifiers

Type Value
idAco013123.v3
pacid33041663
tidAco013123.1.v3
tidAco013123.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0070897 IEAInterProDNA-templated transcriptional preinitiation complex assembly
GO:0080092 IEAPLAZA Integrative Orthologyregulation of pollen tube growthAT2G41630
GO:0009960 IEAPLAZA Integrative Orthologyendosperm developmentAT3G29380
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT3G29380
GO:0009555 IEAPLAZA Integrative Orthologypollen developmentAT3G57370
GO:0055046 IEAPLAZA Integrative OrthologymicrogametogenesisAT3G57370
GO:0010183 IEAPLAZA Integrative Orthologypollen tube guidanceAT2G41630
GO:0000769 IEAPLAZA Integrative Orthologysyncytium formation by mitosis without cytokinesisAT3G29380

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0017025 IEAInterProTBP-class protein binding
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT2G41630

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737 IEAPLAZA Integrative OrthologycytoplasmAT3G10330
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT3G10330

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013763Cyclin-like
IPR000812Transcription factor TFIIB
IPR013137Zinc finger, TFIIB-type
IPR013150Transcription factor TFIIB, cyclin-like domain
IPR023486Transcription factor TFIIB, conserved site

Mapman id Description
15.3.5.2.RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.basal transcription factor (TFIIb)
No SignalP domains detected for this gene.