Gene: Aco012829 (Ananas comosus)

Overview top

Gene Identifier
Aco012829
Transcript Identifier
Aco012829.1
Gene Type
Coding gene
Location
LG03 : 14980914-14997567 : positive

Family

Gene family
HOM04M000657
(193 genes in 29 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
DNA mismatch repair protein MutS

Identifiers

Type Value
idAco012829.v3
pacid33031036
tidAco012829.1.v3
tidAco012829.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412 IEAInterProtranslation
GO:0006298 IEAInterPromismatch repair
GO:0010777 IEAPLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombinationAT4G17380
GO:0045143 IEAPLAZA Integrative Orthologyhomologous chromosome segregationAT4G17380
GO:0007129 IEAPLAZA Integrative OrthologysynapsisAT4G17380

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003735 IEAInterProstructural constituent of ribosome
GO:0005524 IEAInterProATP binding
GO:0030983 IEAInterPromismatched DNA binding
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT4G17390

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005840 IEAInterProribosome
GO:0005622 IEAInterProintracellular
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT4G16720
GO:0016020 IEAPLAZA Integrative OrthologymembraneAT4G17390
GO:0009506 IEAPLAZA Integrative OrthologyplasmodesmaAT4G17380
GO:0043073 IEAPLAZA Integrative Orthologygerm cell nucleusAT4G17380
GO:0000794 IEAPLAZA Integrative Orthologycondensed nuclear chromosomeAT4G17380
GO:0005886 IEAPLAZA Integrative Orthologyplasma membraneAT4G16720
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT4G17390
GO:0005774 IEAPLAZA Integrative Orthologyvacuolar membraneAT4G16720
GO:0022625 IEAPLAZA Integrative Orthologycytosolic large ribosomal subunitAT4G16720
GO:0022626 IEAPLAZA Integrative Orthologycytosolic ribosomeAT4G16720

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR024794Ribosomal protein L15e core domain
IPR000439Ribosomal protein L15e
IPR007696DNA mismatch repair protein MutS, core
IPR007861DNA mismatch repair protein MutS, clamp
IPR000432DNA mismatch repair protein MutS, C-terminal
IPR020925Ribosomal protein L15e, conserved site
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR012678Ribosomal protein L23/L15e core domain

Mapman id Description
13.3.6.5.1.2.1.Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH4
17.1.2.1.16.Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU proteome.component RPL15
No SignalP domains detected for this gene.