Gene: Aco009470 (Ananas comosus)

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Gene Identifier
Aco009470
Transcript Identifier
Aco009470.1
Gene Type
Coding gene
Location
LG01 : 1971611-1974741 : negative

Family

Gene family
HOM04M000365
(308 genes in 29 species)
specific family
Subfamily
ORTHO04M000348
(251 genes in 29 species)
specific family

Descriptions

Description
PHD finger protein ALFIN-like protein

Identifiers

Type Value
idAco009470.v3
pacid33050798
tidAco009470.1.v3
tidAco009470.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355 IEAInterProregulation of transcription, DNA-templated
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT5G20510
GO:0055065 IEAPLAZA Integrative Orthologymetal ion homeostasisAT2G02470
GO:0048767 IEAPLAZA Integrative Orthologyroot hair elongationAT2G02470
GO:0016036 IEAPLAZA Integrative Orthologycellular response to phosphate starvationAT2G02470
GO:0009414 IEAPLAZA Integrative Orthologyresponse to water deprivationAT5G20510

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0042393 IEAInterProhistone binding
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT5G20510
GO:0003714 IEAPLAZA Integrative Orthologytranscription corepressor activityAT5G20510
GO:0035064 IEAPLAZA Integrative Orthologymethylated histone bindingAT5G26210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT5G26210
GO:0005829 IEAPLAZA Integrative OrthologycytosolAT5G26210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR021998Alfin
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR001965Zinc finger, PHD-type
IPR011011Zinc finger, FYVE/PHD-type

Mapman id Description
15.5.8.RNA biosynthesis.transcriptional regulation.transcription factor (Alfin)
No SignalP domains detected for this gene.