Gene: Aco008966 (Ananas comosus)

Overview top

Gene Identifier
Aco008966
Transcript Identifier
Aco008966.1
Gene Type
Coding gene
Location
LG09 : 12521345-12527132 : positive

Family

Gene family
HOM04M001598
(93 genes in 28 species)
specific family

Descriptions

Description
Tripartite motif-containing protein

Identifiers

Type Value
idAco008966.v3
pacid33033278
tidAco008966.1.v3
tidAco008966.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006281 IEAInterProDNA repair
GO:0006974 IEAInterProcellular response to DNA damage stimulus
GO:0080182 IEAPLAZA Integrative Orthologyhistone H3-K4 trimethylationAT1G04020
GO:0010492 IEAPLAZA Integrative Orthologymaintenance of shoot apical meristem identityAT1G04020
GO:0065004 IEAPLAZA Integrative Orthologyprotein-DNA complex assemblyAT1G04020
GO:0000724 IEAPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT1G04020
GO:0006310 IEAPLAZA Integrative OrthologyDNA recombinationAT4G21070
GO:0009934 IEAPLAZA Integrative Orthologyregulation of meristem structural organizationAT1G04020
GO:0071480 IEAPLAZA Integrative Orthologycellular response to gamma radiationAT4G21070
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT1G04020
GO:0048366 IEAPLAZA Integrative Orthologyleaf developmentAT1G04020
GO:0010332 IEAPLAZA Integrative Orthologyresponse to gamma radiationAT4G21070
GO:0010078 IEAPLAZA Integrative Orthologymaintenance of root meristem identityAT1G04020

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAPLAZA Integrative OrthologyDNA bindingAT1G04020
GO:0004842 IEAPLAZA Integrative Orthologyubiquitin-protein transferase activityAT4G21070
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT4G21070

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G04020

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR001357BRCT domain
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR031099BRCA1-associated
IPR034732Extended PHD (ePHD) domain
IPR001965Zinc finger, PHD-type

Mapman id Description
14.3.1.1.DNA damage response.homologous recombination repair (HR).BRCA1–BARD1 DNA-damage response heterodimer.component BRCA1|BARD1
No SignalP domains detected for this gene.