Gene: Aco006003 (Ananas comosus)

Overview top

Gene Identifier
Aco006003
Transcript Identifier
Aco006003.1
Gene Type
Coding gene
Location
LG16 : 9790021-9795204 : negative

Family

Gene family
HOM04M003835
(45 genes in 28 species)
specific family
Subfamily
ORTHO04M005854
(39 genes in 28 species)
specific family

Descriptions

Description
Transducin/WD40 repeat-like superfamily protein

Identifiers

Type Value
idAco006003.v3
pacid33034713
tidAco006003.1.v3
tidAco006003.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010119 IEAPLAZA Integrative Orthologyregulation of stomatal movementAT1G15440
GO:0006364 IEAPLAZA Integrative OrthologyrRNA processingAT1G15440
GO:0009553 IEAPLAZA Integrative Orthologyembryo sac developmentAT1G15440
GO:0009744 IEAPLAZA Integrative Orthologyresponse to sucroseAT1G15440

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515 IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634 IEAPLAZA Integrative OrthologynucleusAT1G15440
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT1G15440

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR027145Periodic tryptophan protein 2
IPR001680WD40 repeat
IPR007148Small-subunit processome, Utp12
IPR020472G-protein beta WD-40 repeat
IPR019775WD40 repeat, conserved site
IPR017986WD40-repeat-containing domain
IPR011047Quinoprotein alcohol dehydrogenase-like superfamily

Mapman id Description
17.1.3.2.1.3.5.Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpB module.assembly factor (PWP2/UTP1)
No SignalP domains detected for this gene.