Gene: Aco005085 (Ananas comosus)

Overview top

Gene Identifier
Aco005085
Transcript Identifier
Aco005085.1
Gene Type
Coding gene
Location
LG07 : 1928352-1932028 : negative

Family

Gene family
HOM04M001090
(129 genes in 29 species)
specific family

Descriptions

Description
telomere repeat binding factor 1

Identifiers

Type Value
idAco005085.v3
pacid33049305
tidAco005085.1.v3
tidAco005085.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334 IEAInterPronucleosome assembly
GO:0009651 IEAPLAZA Integrative Orthologyresponse to salt stressAT1G49950
GO:0009753 IEAPLAZA Integrative Orthologyresponse to jasmonic acidAT1G49950
GO:0046686 IEAPLAZA Integrative Orthologyresponse to cadmium ionAT1G49950
GO:0009751 IEAPLAZA Integrative Orthologyresponse to salicylic acidAT1G49950
GO:0009723 IEAPLAZA Integrative Orthologyresponse to ethyleneAT1G49950
GO:0009733 IEAPLAZA Integrative Orthologyresponse to auxinAT1G49950
GO:0006357 IEAPLAZA Integrative Orthologyregulation of transcription from RNA polymerase II promoterAT1G49950
GO:0009739 IEAPLAZA Integrative Orthologyresponse to gibberellinAT1G49950
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT1G49950

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0042803 IEAPLAZA Integrative Orthologyprotein homodimerization activityAT1G49950
GO:0003691 IEAPLAZA Integrative Orthologydouble-stranded telomeric DNA bindingAT1G49950
GO:0043565 IEAPLAZA Integrative Orthologysequence-specific DNA bindingAT1G49950
GO:0043047 IEAPLAZA Integrative Orthologysingle-stranded telomeric DNA bindingAT3G49850
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G49950
GO:0070491 IEAPLAZA Integrative Orthologyrepressing transcription factor bindingAT1G49950
GO:1990841 IEAPLAZA Integrative Orthologypromoter-specific chromatin bindingAT1G49950
GO:0042162 IEAPLAZA Integrative Orthologytelomeric DNA bindingAT5G67580
GO:0033613 IEAPLAZA Integrative Orthologyactivating transcription factor bindingAT1G49950

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000786 IEAInterPronucleosome
GO:0005634 IEAInterPronucleus
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT1G49950
GO:0000785 IEAPLAZA Integrative OrthologychromatinAT1G49950

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR001005SANT/Myb domain
IPR017930Myb domain
IPR005818Linker histone H1/H5, domain H15
IPR009057Homeobox domain-like

Mapman id Description
12.3.3.1.2.1.Chromatin organisation.histone modifications.histone lysine methylation.PRC2 histone methylation complex.associated protein factors.PRC2-recruiting factor (TRB)
15.5.2.2.RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB-related)
No SignalP domains detected for this gene.