Gene: Aco004228 (Ananas comosus)

Overview top

Gene Identifier
Aco004228
Transcript Identifier
Aco004228.1
Gene Type
Coding gene
Location
LG15 : 544172-545354 : negative

Family

Gene family
HOM04M000147
(594 genes in 29 species)
specific family
Subfamily
ORTHO04M001299
(102 genes in 29 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
histone H2A 11

Identifiers

Type Value
idAco004228.v3
pacid33030320
tidAco004228.1.v3
tidAco004228.1

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0044030 IEAPLAZA Integrative Orthologyregulation of DNA methylationAT2G38810
GO:0009909 IEAPLAZA Integrative Orthologyregulation of flower developmentAT2G38810
GO:0009266 IEAPLAZA Integrative Orthologyresponse to temperature stimulusAT1G52740
GO:0045892 IEAPLAZA Integrative Orthologynegative regulation of transcription, DNA-templatedAT3G54560
GO:0009908 IEAPLAZA Integrative Orthologyflower developmentAT3G54560
GO:0010468 IEAPLAZA Integrative Orthologyregulation of gene expressionAT2G38810
GO:0006970 IEAPLAZA Integrative Orthologyresponse to osmotic stressAT3G54560
GO:0042742 IEAPLAZA Integrative Orthologydefense response to bacteriumAT1G52740
GO:0016048 IEAPLAZA Integrative Orthologydetection of temperature stimulusAT3G54560

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677 IEAInterProDNA binding
GO:0046982 IEAInterProprotein heterodimerization activity
GO:0005515 IEAPLAZA Integrative Orthologyprotein bindingAT1G52740

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000786 IEAInterPronucleosome
GO:0005634 IEAInterPronucleus
GO:0005730 IEAPLAZA Integrative OrthologynucleolusAT2G38810
GO:0005773 IEAPLAZA Integrative OrthologyvacuoleAT1G52740

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR032454Histone H2A, C-terminal domain
IPR007125Histone H2A/H2B/H3
IPR002119Histone H2A
IPR032458Histone H2A conserved site
IPR009072Histone-fold

Mapman id Description
12.1.2.Chromatin organisation.histones.histone (H2A)
No SignalP domains detected for this gene.