Gene: Aco004160 (Ananas comosus)

Overview top

Gene Identifier
Aco004160
Transcript Identifier
Aco004160.1
Gene Type
Coding gene
Location
LG15 : 972573-976364 : negative

Family

Gene family
HOM04M000040
(1490 genes in 29 species)
specific family

Descriptions

Description
RNA-binding protein 1

Identifiers

Type Value
idAco004160.v3
pacid33030056
tidAco004160.1.v3
tidAco004160.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008380 IEAPLAZA Integrative OrthologyRNA splicingAT3G53460
GO:0006396 IEAPLAZA Integrative OrthologyRNA processingAT3G53460
GO:0009631 IEAPLAZA Integrative Orthologycold acclimationAT3G53460
GO:0043489 IEAPLAZA Integrative OrthologyRNA stabilizationAT3G53460
GO:0009409 IEAPLAZA Integrative Orthologyresponse to coldAT2G37220
GO:0009737 IEAPLAZA Integrative Orthologyresponse to abscisic acidAT2G37220
GO:0045087 IEAPLAZA Integrative Orthologyinnate immune responseAT2G37220

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676 IEAInterPronucleic acid binding
GO:0008266 IEAPLAZA Integrative Orthologypoly(U) RNA bindingAT2G37220
GO:0003723 IEAPLAZA Integrative OrthologyRNA bindingAT3G53460
GO:0003729 IEAPLAZA Integrative OrthologymRNA bindingAT2G37220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570 IEAPLAZA Integrative Orthologychloroplast stromaAT2G37220
GO:0009941 IEAPLAZA Integrative Orthologychloroplast envelopeAT2G37220
GO:0009534 IEAPLAZA Integrative Orthologychloroplast thylakoidAT2G37220
GO:0009579 IEAPLAZA Integrative OrthologythylakoidAT2G37220
GO:0009535 IEAPLAZA Integrative Orthologychloroplast thylakoid membraneAT2G37220
GO:0009507 IEAPLAZA Integrative OrthologychloroplastAT2G37220
GO:0010319 IEAPLAZA Integrative OrthologystromuleAT2G37220

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000504RNA recognition motif domain

Mapman id Description
35.1not assigned.annotated
No SignalP domains detected for this gene.